Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005118.1 Corchorus capsularis cultivar CVL-1 contig05136, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4086

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
99--127
13
2.3
13
94
5
51
72
0
0
27
0.85
234--290
26
2.2
26
96
0
105
61
7
5
26
1.43
1277--1309
16
2.1
16
94
0
57
48
12
21
18
1.80
1394--1448
26
2.1
26
83
6
67
34
9
23
32
1.86
1352--1575
91
2.5
91
90
2
344
35
12
20
31
1.90
3776--3800
13
1.9
13
100
0
50
48
0
0
52
1.00

Tables:   1

The End!