Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005124.1 Corchorus capsularis cultivar CVL-1 contig05142, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3990

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
704--1221
55
9.3
55
83
8
602
50
6
16
25
1.70
704--894
63
3.0
63
95
0
328
50
6
15
26
1.69
1024--1111
29
3.1
28
69
21
76
50
7
17
25
1.73
1452--1685
22
10.8
21
70
15
147
56
7
19
16
1.63
1509--1873
21
17.3
20
67
20
115
54
6
20
18
1.65
1622--1693
22
3.3
22
81
9
69
58
6
22
12
1.58
1937--1999
27
2.3
28
75
5
76
61
0
20
17
1.34
1944--2007
27
2.2
28
78
10
76
62
0
21
15
1.32

Tables:   1

The End!