Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005131.1 Corchorus capsularis cultivar CVL-1 contig05149, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6121

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1596--1676
37
2.2
37
86
0
117
45
6
19
28
1.74
1629--1769
52
2.7
51
88
4
192
48
6
18
26
1.72
1698--1730
7
4.7
7
89
10
50
48
9
15
27
1.74
1704--1732
15
1.9
15
100
0
58
48
10
13
27
1.75
1736--1802
32
2.1
31
86
10
91
49
5
19
25
1.71
2028--2097
31
2.3
31
92
0
113
58
5
21
14
1.57
2046--2097
16
3.3
16
83
5
79
57
5
21
15
1.58
2028--2097
15
4.5
16
76
5
72
58
5
21
14
1.57
2107--2180
28
2.5
28
80
12
78
60
2
20
16
1.47
2129--2203
35
2.1
36
90
2
116
57
2
22
17
1.52
2197--2253
15
3.9
15
72
22
50
59
3
15
21
1.51
2298--2367
2
36.5
2
75
13
58
45
1
4
48
1.30
3084--3122
18
2.1
19
86
13
55
53
0
17
28
1.44

Tables:   1

The End!