Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005139.1 Corchorus capsularis cultivar CVL-1 contig05157, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7536

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
497--540
19
2.4
18
85
11
54
0
27
0
72
0.85
2421--2469
21
2.3
22
75
10
57
38
14
2
44
1.56
2922--2983
24
2.6
24
89
0
88
35
11
4
48
1.60
3704--3755
24
2.3
23
80
12
63
55
0
3
40
1.18
4014--4143
46
2.8
46
73
12
131
29
8
12
50
1.69
4511--4556
21
2.2
21
100
0
92
32
17
0
50
1.47
5256--5290
2
17.5
2
100
0
70
48
0
0
51
1.00
5359--5383
2
12.5
2
100
0
50
0
0
48
52
1.00
6330--6632
166
1.8
167
81
8
386
33
16
17
33
1.92

Tables:   1

The End!