Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000514.1 Corchorus capsularis cultivar CVL-1 contig00514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1082

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
126--183
22
2.6
21
76
10
53
37
17
10
34
1.84
176--241
22
2.9
22
84
8
71
30
6
19
43
1.75
243--404
22
7.4
21
74
11
114
39
9
16
34
1.81
292--665
44
8.3
43
69
15
154
40
9
14
34
1.79
428--665
22
10.8
22
74
11
139
42
10
13
33
1.78
681--1014
22
15.7
22
67
18
113
41
8
15
35
1.77
760--929
66
2.6
65
77
8
166
41
8
15
34
1.77

Tables:   1

The End!