Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005159.1 Corchorus capsularis cultivar CVL-1 contig05177, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2577

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
939--1017
2
44.5
2
70
26
54
46
2
0
50
1.14
941--1020
7
11.4
7
70
17
51
46
2
0
51
1.14
936--1020
16
5.4
16
73
24
74
45
2
0
51
1.13
936--1020
30
2.7
32
77
18
106
45
2
0
51
1.13
939--1022
18
4.6
19
71
21
72
46
2
0
51
1.14
1058--1084
14
1.9
14
100
0
54
40
14
7
37
1.74
1463--1545
42
2.0
43
85
7
116
39
2
27
30
1.69

Tables:   1

The End!