Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005161.1 Corchorus capsularis cultivar CVL-1 contig05179, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2961

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
493--584
39
2.3
39
92
1
148
28
30
7
33
1.85
1213--1247
7
4.7
7
86
13
52
68
14
14
2
1.32
1734--1802
34
2.0
34
97
0
129
36
15
18
28
1.92
2139--2182
17
2.4
18
88
11
72
59
2
0
38
1.10
2148--2184
17
2.2
17
100
0
74
59
0
0
40
0.97
2409--2455
21
2.2
21
84
0
58
27
14
8
48
1.73

Tables:   1

The End!