Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005181.1 Corchorus capsularis cultivar CVL-1 contig05199, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14329

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
910--2018
440
2.5
440
84
2
1397
41
17
13
27
1.87
9795--9933
69
2.0
69
94
2
244
56
2
6
34
1.40
10177--10216
4
9.8
4
97
2
71
50
0
22
27
1.50
11939--11977
21
1.9
21
89
5
62
33
5
0
61
1.18
12380--12426
3
15.7
3
100
0
94
65
0
0
34
0.93
12700--13121
211
2.0
211
94
0
747
34
13
17
35
1.89
13897--13933
19
2.0
19
89
5
58
32
2
0
64
1.07
14048--14074
13
2.1
13
100
0
54
40
0
14
44
1.46

Tables:   1

The End!