Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005192.1 Corchorus capsularis cultivar CVL-1 contig05210, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24211

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4615--4691
36
2.1
36
95
0
136
36
19
16
27
1.93
6112--6136
1
25.0
1
100
0
50
0
0
0
100
0.00
10359--11381
328
3.2
329
74
13
835
35
14
16
33
1.89
9692--11187
636
2.3
637
78
9
1604
35
15
15
33
1.89
12073--12097
13
1.9
13
100
0
50
56
4
16
24
1.57
12073--12109
18
2.1
18
94
0
65
56
2
16
24
1.53
16699--16767
26
2.6
28
84
13
92
40
14
8
36
1.77
16699--16767
27
2.6
26
84
13
88
40
14
8
36
1.77
22899--22929
6
5.2
6
96
0
53
87
12
0
0
0.55

Tables:   1

The End!