Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005199.1 Corchorus capsularis cultivar CVL-1 contig05217, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3249

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
385--434
7
7.4
7
90
4
77
0
30
0
70
0.88
385--441
6
8.8
6
88
9
69
0
29
0
70
0.88
385--441
26
2.2
26
93
0
96
0
29
0
70
0.88
579--604
11
2.4
11
100
0
52
0
7
0
92
0.39
579--608
12
2.6
12
94
5
53
0
10
0
90
0.47
2138--2203
31
2.2
29
77
17
73
40
10
27
21
1.86

Tables:   1

The End!