Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005205.1 Corchorus capsularis cultivar CVL-1 contig05223, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4411

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1854--2134
110
2.6
110
85
3
354
34
10
9
45
1.71
2740--2780
19
2.2
19
86
4
57
68
2
19
9
1.29
4087--4225
61
2.2
64
87
6
194
44
19
13
22
1.85
4192--4246
23
2.5
24
85
11
73
40
27
16
16
1.89
4148--4411
87
3.0
87
91
2
404
40
19
16
23
1.91
4293--4336
21
2.0
23
86
8
65
38
25
15
20
1.92

Tables:   1

The End!