Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005211.1 Corchorus capsularis cultivar CVL-1 contig05229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5304

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
394--446
25
2.1
26
92
3
90
35
16
11
35
1.85
2454--2518
30
2.1
31
91
2
105
27
18
4
49
1.67
3920--3957
19
2.0
20
85
15
53
28
5
2
63
1.30
4076--4124
22
2.2
22
88
0
71
26
4
24
44
1.71
4155--4533
22
16.9
22
69
15
177
38
10
16
34
1.82
4642--4686
19
2.3
19
88
3
63
44
8
22
24
1.81
4677--5214
22
24.7
22
69
9
178
39
10
14
36
1.79

Tables:   1

The End!