Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005214.1 Corchorus capsularis cultivar CVL-1 contig05232, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11124

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
958--1190
47
4.9
47
88
1
331
36
20
22
21
1.96
1181--1486
69
4.4
70
80
2
332
26
18
29
25
1.98
1176--1486
139
2.2
138
90
0
487
26
19
29
25
1.98
2719--2744
11
2.4
11
100
0
52
0
15
0
84
0.62
2716--2745
6
5.2
6
92
8
53
0
16
0
83
0.65
3068--3123
12
4.7
12
80
8
69
0
19
0
80
0.71
3071--3114
9
5.2
9
81
15
58
0
22
0
77
0.77
3068--3141
24
3.1
23
75
14
69
0
24
0
75
0.80
9332--9378
21
2.2
22
78
17
55
34
10
12
42
1.78
10424--10456
7
4.6
7
92
7
57
66
15
0
18
1.25
10424--10456
15
2.3
14
94
5
57
66
15
0
18
1.25
10811--10848
18
2.2
17
86
13
51
0
36
0
63
0.95

Tables:   1

The End!