Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005218.1 Corchorus capsularis cultivar CVL-1 contig05236, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7812

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1374--1408
16
2.1
16
89
5
52
11
31
5
51
1.61
1713--1747
7
4.7
7
86
13
52
2
14
14
68
1.32
2378--2453
39
1.9
39
100
0
152
46
6
23
23
1.76
2428--2558
39
3.3
39
95
1
226
32
8
31
27
1.86
2389--2558
78
2.2
78
81
3
189
35
8
29
26
1.85

Tables:   1

The End!