Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005226.1 Corchorus capsularis cultivar CVL-1 contig05244, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2433

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
614--646
10
3.3
10
100
0
66
0
18
63
18
1.31
617--741
6
20.2
6
68
26
66
3
17
46
32
1.64
637--692
15
3.7
15
88
4
85
5
14
42
37
1.68
684--740
11
5.0
11
72
8
51
1
17
49
31
1.57
681--741
23
2.7
23
84
5
79
1
19
45
32
1.60
681--741
29
2.1
29
84
6
79
1
19
45
32
1.60
1487--1577
6
15.3
6
71
28
54
1
18
45
35
1.57
1498--1569
16
4.8
16
68
26
50
1
16
44
37
1.57
1541--1574
17
2.0
17
88
11
52
0
17
52
29
1.45

Tables:   1

The End!