Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005227.1 Corchorus capsularis cultivar CVL-1 contig05245, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2737

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1236--1376
16
8.5
16
74
15
99
7
17
36
38
1.78
1284--1377
32
3.0
31
87
4
143
6
18
37
38
1.76
1278--1405
48
2.8
45
84
6
159
7
18
36
36
1.80
1764--1800
13
2.8
13
87
4
56
18
13
0
67
1.23
1880--1918
21
2.0
21
85
10
55
53
5
7
33
1.51
1961--2014
16
3.4
16
87
5
74
9
20
37
33
1.84
1945--2030
32
2.7
31
74
16
77
10
20
36
32
1.87
1974--2033
16
3.8
16
88
4
86
10
16
36
36
1.82
2003--2078
16
4.8
16
81
3
73
9
17
42
31
1.80
2003--2079
32
2.4
32
76
4
84
9
18
41
31
1.81
2116--2168
26
2.0
26
85
10
72
7
15
52
24
1.68

Tables:   1

The End!