Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005228.1 Corchorus capsularis cultivar CVL-1 contig05246, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6084

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
557--583
2
13.5
2
100
0
54
48
0
0
51
1.00
1864--1897
15
2.3
15
89
0
50
2
14
0
82
0.79
2342--2444
45
2.4
44
85
10
149
26
4
4
64
1.34
2807--2859
24
2.2
24
93
6
90
24
11
13
50
1.73
5461--5730
75
3.6
75
92
2
434
34
16
7
41
1.77

Tables:   1

The End!