Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005237.1 Corchorus capsularis cultivar CVL-1 contig05255, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9117

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--46
2
20.5
2
94
5
73
50
0
0
50
1.00
72--397
164
2.0
164
93
0
553
41
10
20
28
1.85
5576--5621
20
2.3
20
88
3
76
41
4
15
39
1.67
6052--6201
45
3.3
45
83
0
192
44
19
8
27
1.79
7713--7740
13
2.2
13
100
0
56
42
7
17
32
1.77

Tables:   1

The End!