Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005241.1 Corchorus capsularis cultivar CVL-1 contig05259, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1629

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
480--626
42
3.5
42
95
0
267
31
8
23
36
1.84
600--654
28
2.0
28
85
0
74
29
12
23
34
1.92
617--700
35
2.4
35
83
0
105
29
9
16
44
1.80
933--1295
37
9.8
37
76
7
328
42
15
17
24
1.87
935--1296
74
4.9
74
89
2
550
42
14
17
24
1.87

Tables:   1

The End!