Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005249.1 Corchorus capsularis cultivar CVL-1 contig05267, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1388

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94--168
27
2.8
27
81
4
89
46
22
14
16
1.83
421--498
39
2.0
40
84
2
104
42
17
12
26
1.86
553--591
20
2.0
20
89
0
60
23
25
28
23
1.99
699--758
22
2.5
25
76
15
72
26
21
25
26
2.00
860--939
25
3.3
25
70
10
85
28
22
25
23
1.99
876--949
22
3.2
22
70
10
67
28
18
22
29
1.98
858--966
47
2.3
47
96
0
200
25
21
25
27
1.99
889--961
22
3.2
22
70
11
74
21
19
30
28
1.98

Tables:   1

The End!