Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005275.1 Corchorus capsularis cultivar CVL-1 contig05293, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11576

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3091--3155
19
3.3
19
67
23
53
15
9
23
52
1.71
3119--3186
26
2.6
27
86
4
95
13
8
23
54
1.66
3141--3182
19
2.1
20
86
8
59
14
9
23
52
1.71
3208--3243
7
5.1
7
100
0
72
13
13
13
58
1.64
3208--3276
19
3.5
20
81
15
81
14
10
20
55
1.68
5491--5721
35
6.6
35
88
4
299
32
19
9
38
1.83
9280--9323
22
2.0
22
86
0
61
45
13
11
29
1.79
9608--9814
36
5.8
36
70
8
136
39
27
15
17
1.90
9608--9919
71
4.4
71
77
3
277
39
26
17
16
1.91
9684--9807
35
3.5
35
78
10
135
42
25
15
16
1.87
9942--10036
35
2.8
34
80
3
100
36
18
21
23
1.95

Tables:   1

The End!