Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005276.1 Corchorus capsularis cultivar CVL-1 contig05294, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12420

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2411--2449
10
3.9
10
89
0
60
43
20
5
30
1.73
2411--2449
20
2.0
20
100
0
78
43
20
5
30
1.73
3461--3511
12
4.2
12
90
5
84
25
21
15
37
1.93
3461--3511
25
2.1
24
92
3
84
25
21
15
37
1.93
11141--11175
15
2.3
15
90
0
52
45
22
20
11
1.82

Tables:   1

The End!