Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005279.1 Corchorus capsularis cultivar CVL-1 contig05297, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3423

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
404--450
11
4.2
11
74
15
51
59
17
12
10
1.60
487--765
138
2.0
138
99
0
549
37
17
11
33
1.86
2475--3052
22
26.6
22
69
12
245
36
16
9
38
1.81
2354--2513
62
2.6
62
91
2
259
35
13
9
41
1.77
2834--2881
16
2.7
18
81
9
55
41
14
8
35
1.76
3134--3278
22
6.6
22
75
7
91
31
12
11
44
1.78
3133--3278
44
3.3
44
73
11
118
31
13
11
43
1.79

Tables:   1

The End!