Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005287.1 Corchorus capsularis cultivar CVL-1 contig05305, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24374

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5227--5341
30
3.8
30
79
4
142
37
19
6
36
1.79
5231--5349
60
2.0
60
98
0
229
37
18
7
36
1.79
6788--6816
2
15.0
2
92
7
51
48
0
0
51
1.00
7514--7627
11
10.8
11
67
11
60
51
1
2
43
1.25
7565--7629
20
3.2
20
78
8
76
53
0
3
43
1.16
8032--8067
13
2.8
13
91
4
56
27
22
13
36
1.92
8242--8402
34
4.8
32
74
10
126
14
23
24
37
1.93
8251--8402
67
2.3
67
81
5
173
14
24
25
35
1.93
8487--8601
32
3.6
31
83
6
133
26
25
20
27
1.99
8987--9063
31
2.5
31
91
0
118
23
18
23
35
1.96
11230--11673
167
2.7
164
85
3
575
39
15
15
29
1.88
21073--21097
12
2.1
12
100
0
50
32
8
28
32
1.86
22442--22467
7
3.7
7
100
0
52
53
15
15
15
1.73

Tables:   1

The End!