Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005293.1 Corchorus capsularis cultivar CVL-1 contig05311, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10313

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
266--298
2
16.5
2
87
12
50
48
0
3
48
1.17
1401--1455
20
2.8
20
77
0
65
36
10
1
50
1.48
1960--2141
87
2.1
87
92
0
310
34
10
7
47
1.66
2204--2241
20
1.9
20
88
0
58
28
10
13
47
1.76
4193--4285
47
2.0
47
95
0
168
26
24
5
43
1.76
4759--5514
199
3.8
199
87
3
998
34
19
12
33
1.89
5647--5855
102
2.0
103
87
2
303
42
11
8
37
1.72
8285--8324
7
6.0
7
97
2
66
45
10
0
45
1.37

Tables:   1

The End!