Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005297.1 Corchorus capsularis cultivar CVL-1 contig05315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10587

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
362--407
4
11.8
4
95
4
85
26
23
0
50
1.50
405--441
2
18.5
2
100
0
74
48
0
0
51
1.00
414--495
40
2.0
40
90
0
128
53
3
9
32
1.51
8577--8645
18
3.8
18
72
0
57
20
56
13
10
1.65
8612--8677
27
2.4
27
92
0
105
21
53
10
15
1.72
9868--9895
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!