Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005312.1 Corchorus capsularis cultivar CVL-1 contig05330, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6299

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
252--302
23
2.2
23
82
6
59
74
5
15
3
1.16
1528--1574
22
2.1
22
96
0
85
42
4
6
46
1.48
1528--1570
11
3.9
11
90
0
68
41
4
6
46
1.51
1806--1849
2
21.0
2
86
9
61
50
2
2
45
1.27
3294--3323
14
2.1
14
100
0
60
43
0
0
56
0.99
4767--4830
27
2.3
27
94
2
110
56
7
26
9
1.58

Tables:   1

The End!