Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005314.1 Corchorus capsularis cultivar CVL-1 contig05332, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7595

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1264--1322
19
2.9
21
73
21
61
35
18
3
42
1.67
1292--1323
11
2.9
11
90
0
55
43
18
0
37
1.51
1264--1323
22
2.9
22
76
19
65
36
18
3
41
1.67
5825--5850
7
3.7
7
100
0
52
38
0
0
61
0.96
6808--6863
25
2.2
25
90
3
85
26
7
8
57
1.55
6874--6998
66
1.9
66
82
9
157
32
14
7
46
1.72

Tables:   1

The End!