Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005316.1 Corchorus capsularis cultivar CVL-1 contig05334, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5490

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
826--1157
141
2.4
141
91
3
544
42
9
9
37
1.71
1517--1557
19
2.2
19
95
0
73
51
4
7
36
1.51
1536--1665
40
3.2
40
76
4
136
50
6
19
24
1.70
1483--1597
59
2.0
58
89
5
178
51
3
17
27
1.61
1631--1715
32
2.7
32
88
0
116
55
4
20
20
1.61
2401--2431
7
4.6
7
96
4
55
45
9
0
45
1.36
4181--4205
13
1.9
13
100
0
50
16
28
8
48
1.74

Tables:   1

The End!