Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005323.1 Corchorus capsularis cultivar CVL-1 contig05341, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3701

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1179--1227
20
2.5
19
77
9
53
44
6
6
42
1.54
1291--1359
31
2.3
31
97
2
131
44
10
2
42
1.53
2693--2910
122
1.8
119
83
5
285
47
3
11
38
1.55
3256--3338
23
3.7
23
68
7
62
24
26
36
13
1.92
3578--3614
18
2.1
18
100
0
74
16
16
56
10
1.66
3598--3677
30
2.5
33
82
15
89
21
26
33
18
1.96

Tables:   1

The End!