Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005327.1 Corchorus capsularis cultivar CVL-1 contig05345, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2517

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1166--1315
58
2.6
58
78
3
169
43
6
22
28
1.77
1307--1354
22
2.2
22
84
0
60
41
10
22
25
1.85
1317--1358
22
2.0
22
90
4
68
42
9
21
26
1.83
1322--1412
36
2.5
36
83
0
110
38
4
28
28
1.76
1358--1399
22
1.9
22
85
9
59
33
2
33
30
1.71
1359--1406
22
2.2
22
81
7
53
37
2
33
27
1.69
1458--1493
16
2.2
16
90
0
54
41
2
25
30
1.69
1512--1565
21
2.5
21
87
6
72
46
5
18
29
1.72
1544--1675
58
2.3
59
84
4
160
42
12
23
21
1.87
1660--1840
8
22.1
8
69
15
104
48
2
23
25
1.62
1661--1841
24
7.7
24
74
13
117
48
2
22
25
1.64
1685--1808
45
2.7
43
82
7
140
50
1
21
25
1.58

Tables:   1

The End!