Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005348.1 Corchorus capsularis cultivar CVL-1 contig05366, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7434

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3868--3902
10
3.6
10
84
7
54
77
0
0
22
0.78
3865--3901
9
4.0
9
86
6
56
70
0
0
29
0.88
3866--3903
19
2.0
19
100
0
76
73
0
0
26
0.83
3925--4080
33
4.8
33
94
1
269
7
37
36
17
1.79
3925--4080
65
2.4
66
93
2
269
7
37
36
17
1.79
4170--4237
26
2.6
26
86
4
84
33
2
8
54
1.47
4247--4305
25
2.4
25
89
10
88
40
1
23
33
1.65
4601--4687
32
2.7
32
89
0
129
13
11
36
37
1.81
4862--4904
16
2.7
16
77
0
50
4
11
30
53
1.57
4836--4931
48
2.0
48
84
10
124
11
11
29
47
1.74

Tables:   1

The End!