Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01000535.1 Corchorus capsularis cultivar CVL-1 contig00535, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4898

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--335
30
8.0
27
76
11
141
56
2
22
18
1.53
198--272
26
2.7
26
85
8
78
60
4
20
16
1.52
156--330
83
2.1
84
82
8
205
57
1
24
17
1.49
119--329
113
1.9
112
80
8
248
56
2
22
18
1.53
3687--3720
10
3.3
10
91
4
50
82
0
2
14
0.79
3687--3720
11
3.2
11
91
4
52
82
0
2
14
0.79

Tables:   1

The End!