Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005350.1 Corchorus capsularis cultivar CVL-1 contig05368, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5259

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
389--454
31
2.1
31
86
5
89
28
19
4
46
1.69
554--630
38
2.1
36
88
7
111
14
16
12
55
1.69
763--805
19
2.1
21
84
16
56
27
6
2
62
1.33
971--1132
22
7.3
22
73
13
89
33
9
19
37
1.85
1164--1206
22
2.0
22
86
9
61
41
9
18
30
1.82
1249--1291
22
2.0
22
81
9
52
32
6
18
41
1.77
1382--1549
22
7.7
22
75
3
97
41
10
14
34
1.79
1404--1564
44
3.7
43
73
8
139
40
10
14
33
1.81
1654--1976
22
15.0
22
72
13
185
39
8
16
34
1.80
1919--1996
22
3.5
23
81
11
74
35
12
14
37
1.84
2375--2402
2
14.0
2
100
0
56
50
0
0
50
1.00
3843--3878
3
12.0
3
100
0
72
66
0
33
0
0.92

Tables:   1

The End!