Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005353.1 Corchorus capsularis cultivar CVL-1 contig05371, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6180

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4455--4581
15
8.5
15
69
23
74
51
1
1
44
1.20
4456--4597
41
3.3
41
70
21
112
49
1
1
47
1.18
4494--4572
39
2.0
40
90
5
124
51
2
2
43
1.28
4449--4589
39
3.9
36
77
17
118
51
1
2
44
1.22
4474--4584
13
8.8
13
68
25
69
52
1
1
44
1.22
5880--5940
31
2.0
30
93
3
104
63
14
3
18
1.43
6112--6141
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!