Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005359.1 Corchorus capsularis cultivar CVL-1 contig05377, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8197

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
981--1081
27
3.7
26
77
10
87
41
0
8
48
1.41
1005--1078
30
2.6
29
89
8
109
43
0
10
45
1.39
7971--8014
21
2.1
21
91
0
70
22
31
11
34
1.90
8066--8190
33
3.8
32
83
7
128
15
41
32
10
1.81

Tables:   1

The End!