Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005364.1 Corchorus capsularis cultivar CVL-1 contig05382, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10775

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8718--8753
14
2.7
13
95
4
63
38
8
5
47
1.57
8718--8794
14
5.1
15
70
11
59
35
7
10
46
1.67
8714--8820
47
2.3
46
84
9
128
39
7
10
42
1.67
8718--8877
67
2.4
64
78
17
168
40
7
10
41
1.68
9175--9240
11
5.2
12
73
21
55
75
0
15
9
1.03
9175--9240
26
2.6
27
81
13
77
75
0
15
9
1.03
9539--9588
6
8.8
6
82
12
52
78
6
16
0
0.95
9539--9586
16
2.9
17
87
3
71
77
6
16
0
0.97

Tables:   1

The End!