Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005370.1 Corchorus capsularis cultivar CVL-1 contig05388, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1652

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
882--941
31
1.9
31
86
6
86
33
20
3
43
1.68
1217--1339
22
5.6
22
75
10
90
42
8
16
32
1.79
1232--1331
22
4.5
22
82
0
101
43
8
19
30
1.79
1501--1598
22
4.6
21
68
16
60
44
11
9
34
1.72
1462--1591
63
2.1
63
86
4
183
46
10
10
31
1.73
1508--1556
23
2.1
23
88
0
71
46
12
10
30
1.74

Tables:   1

The End!