Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005379.1 Corchorus capsularis cultivar CVL-1 contig05397, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10182

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--49
2
24.5
2
100
0
98
0
48
0
51
1.00
666--701
11
3.3
11
88
0
54
2
11
19
66
1.35
4562--4613
15
3.5
14
76
10
50
36
1
0
61
1.07
4756--4903
74
2.0
73
93
3
253
20
29
9
40
1.84
6995--7060
32
2.1
32
100
0
132
21
36
13
28
1.91
9411--9462
12
4.2
12
90
4
86
25
25
15
34
1.95
9604--9640
6
6.3
6
96
3
67
51
0
32
16
1.45
9763--10177
137
3.0
137
94
1
719
38
19
10
31
1.86

Tables:   1

The End!