Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005401.1 Corchorus capsularis cultivar CVL-1 contig05419, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6029

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
675--832
75
2.1
74
88
3
228
40
8
29
21
1.83
1460--1515
18
3.1
18
85
10
78
16
1
60
21
1.44
2539--2573
12
2.9
12
91
0
52
0
22
68
8
1.16
4212--5773
332
4.6
330
82
5
1503
37
15
14
33
1.87
5074--6029
367
2.6
367
87
4
1354
36
15
15
32
1.89

Tables:   1

The End!