Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005402.1 Corchorus capsularis cultivar CVL-1 contig05420, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15164

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4358--4473
3
38.7
3
91
0
115
30
37
0
32
1.58
4471--4577
53
2.0
53
100
0
214
31
21
13
33
1.91
9370--9791
211
2.0
211
92
0
711
37
16
9
36
1.81
11371--11396
6
4.3
6
100
0
52
0
34
15
50
1.45

Tables:   1

The End!