Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005408.1 Corchorus capsularis cultivar CVL-1 contig05426, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2969

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--238
31
7.0
31
75
8
209
10
28
30
30
1.90
13--164
63
2.4
63
88
0
223
9
28
30
30
1.88
805--845
10
4.1
10
90
0
55
24
17
26
31
1.97
1538--1591
25
2.2
25
86
0
72
11
33
29
25
1.91
1550--1603
25
2.2
25
89
0
81
11
31
31
25
1.91
1538--1735
63
3.3
62
80
7
221
11
30
30
27
1.91
1535--1735
31
6.6
31
80
9
218
11
30
30
27
1.91
1735--2688
329
2.9
328
87
5
1318
37
14
12
34
1.84

Tables:   1

The End!