Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005410.1 Corchorus capsularis cultivar CVL-1 contig05428, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15017

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2827--2856
13
2.4
12
94
5
51
90
0
10
0
0.47
2827--2865
18
2.2
17
86
4
51
87
2
10
0
0.65
3611--3649
2
19.5
2
100
0
78
48
0
0
51
1.00
7994--8022
5
6.0
5
96
4
51
17
0
0
82
0.66
8042--8072
2
15.5
2
93
0
53
3
51
0
45
1.17
10716--10792
29
2.7
29
79
4
93
16
23
15
44
1.86
10930--11007
29
2.6
30
91
2
131
38
17
29
14
1.89
10930--11027
30
3.3
29
87
7
117
35
18
30
15
1.92

Tables:   1

The End!