Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005413.1 Corchorus capsularis cultivar CVL-1 contig05431, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22035

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
331--381
25
2.0
26
92
3
86
39
3
7
49
1.51
333--400
25
2.7
26
84
8
79
38
7
8
45
1.63
2271--2316
12
3.8
12
82
0
56
41
10
19
28
1.85
4518--5302
306
2.5
304
80
5
927
24
20
29
25
1.99
5724--7778
313
6.5
312
83
3
2486
24
19
30
25
1.98
5724--7778
630
3.3
631
87
2
2871
24
19
30
25
1.98
10767--10794
14
2.0
14
100
0
56
35
0
64
0
0.94
11192--11355
78
2.1
79
86
4
224
33
16
1
48
1.57
12049--12087
13
3.0
13
84
0
51
35
2
0
61
1.10
12438--12487
20
2.6
20
84
12
61
38
6
6
50
1.52

Tables:   1

The End!