Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005417.1 Corchorus capsularis cultivar CVL-1 contig05435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21738

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1344--1761
139
3.0
139
99
0
827
21
19
9
49
1.76
4577--4615
16
2.4
16
87
8
53
2
30
0
66
1.05
6351--6471
60
2.0
60
93
0
206
56
11
9
23
1.63
7067--7108
11
3.7
11
81
15
50
40
0
4
54
1.21
10746--10829
41
2.0
41
97
0
159
20
2
23
53
1.57
11392--11447
29
2.0
28
82
3
67
44
12
17
25
1.84
12603--12723
62
2.0
61
95
1
215
36
5
13
44
1.67
12793--12907
57
2.0
57
91
0
185
51
19
8
20
1.73
12946--12981
1
36.0
1
100
0
72
0
0
0
100
0.00

Tables:   1

The End!