Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005420.1 Corchorus capsularis cultivar CVL-1 contig05438, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6669

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
533--584
22
2.4
21
87
6
68
76
0
17
5
0.97
564--594
16
1.9
16
93
0
53
74
0
12
12
1.08
1171--1492
166
1.9
166
85
5
436
39
16
13
30
1.88
1874--1963
45
2.0
45
93
0
153
25
20
20
34
1.96
1297--2087
323
2.4
322
92
1
1291
36
16
16
30
1.91
4457--4495
19
2.1
19
85
0
51
30
25
17
25
1.97
4559--4660
51
2.0
51
88
7
154
43
6
37
12
1.70
5257--5283
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!