Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005422.1 Corchorus capsularis cultivar CVL-1 contig05440, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3242

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
590--634
23
2.0
23
86
0
63
37
13
28
20
1.90
747--779
10
3.3
10
100
0
66
39
21
9
30
1.84
1454--1514
31
2.0
31
90
0
95
40
6
18
34
1.76
2350--2408
6
9.8
6
88
0
82
33
11
0
54
1.37
2350--2408
12
4.9
12
91
0
91
33
11
0
54
1.37
2350--2408
18
3.3
18
90
0
91
33
11
0
54
1.37
3013--3230
33
6.6
33
90
1
305
19
35
30
13
1.91

Tables:   1

The End!