Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005434.1 Corchorus capsularis cultivar CVL-1 contig05452, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19100

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--34
2
15.5
2
100
0
62
48
0
0
51
1.00
1449--1737
145
2.0
145
95
0
515
25
26
17
30
1.98
2540--2595
23
2.4
24
84
3
78
3
5
7
83
0.88
3196--3224
3
9.7
3
100
0
58
31
0
0
68
0.89
7158--7297
6
24.3
6
80
8
157
39
15
30
14
1.87
7136--7297
57
2.9
57
87
5
219
40
16
29
14
1.87

Tables:   1

The End!