Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005435.1 Corchorus capsularis cultivar CVL-1 contig05453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28612

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18142--18330
33
5.5
36
70
21
129
34
21
14
29
1.93
18173--18364
33
5.9
33
75
15
177
34
20
15
28
1.94
18131--18329
99
2.0
99
100
0
398
35
20
14
30
1.92
18280--18421
30
4.6
30
83
7
160
32
18
17
31
1.94
23093--23163
17
4.2
17
69
5
54
23
16
5
53
1.64
23093--23163
35
2.1
33
92
5
115
23
16
5
53
1.64
24030--24078
25
2.0
25
84
8
64
30
4
10
55
1.52
24116--24193
39
2.0
40
82
10
97
35
7
14
42
1.74
26659--26695
19
1.9
19
94
0
65
51
21
8
18
1.72

Tables:   1

The End!