Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01005438.1 Corchorus capsularis cultivar CVL-1 contig05456, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6702

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
128--201
37
2.0
37
81
5
87
43
6
14
35
1.72
1943--2086
78
1.8
78
85
2
200
26
27
19
26
1.99
3178--3205
2
14.0
2
100
0
56
50
0
0
50
1.00
4217--4245
2
15.0
2
92
7
51
51
0
0
48
1.00
6355--6406
25
2.1
25
85
7
70
38
13
13
34
1.84

Tables:   1

The End!